Available plugins - MOSHPIT documentation

Name	Short Description
`alignment`	Plugin for generating and manipulating alignments.
`assembly`	QIIME 2 plugin for (meta)genome assembly.
`metadata`	Plugin for working with Metadata.
`annotate`	QIIME 2 plugin for metagenome analysis.
`demux`	Plugin for demultiplexing & viewing sequence quality.
`sourmash`	Plugin for generation of MinHash signatures.
`rescript`	Pipeline for reference sequence annotation and curation.
`cutadapt`	Plugin for removing adapter sequences, primers, and other unwanted sequence from sequence data.
`quality-filter`	Plugin for PHRED-based filtering and trimming.
`longitudinal`	Plugin for paired sample and time series analyses.
`types`	Plugin defining types for microbiome analysis.
`fondue`	Plugin for fetching sequences and metadata.
`quality-control`	Plugin for quality control of feature and sequence data.
`feature-classifier`	Plugin for taxonomic classification.
`sapienns`	Plugin for interacting with biobakery data.
`emperor`	Plugin for ordination plotting with Emperor.
`diversity`	Plugin for exploring community diversity.
`diversity-lib`	Plugin for computing community diversity.
`composition`	Plugin for compositional data analysis.
`feature-table`	Plugin for working with sample by feature tables.
`taxa`	Plugin for working with feature taxonomy annotations.
`sample-classifier`	Plugin for machine learning prediction of sample metadata.
`vsearch`	Plugin for clustering and dereplicating with vsearch.
`vizard`	Generalized microbiome data visualization.